I
dentification
D
ifferentially
E
xpressed
G
enes
6
test statistics

IDEG6:

A web tool for the identification of differentially expressed genes in multiple tag sampling experiments


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References

HGXP Human Genome Expression Profiles

IDEG6 previous release and command line version download


MAIN FEATURES ?
IDEG6 allows identification of differentially expressed genes by statistical analysis of large matrices of multiconditional expression data (ESTs or SAGE tags counts), the selection of different test statistics, possibly with Bonferroni correction and the display of result tables, linked to the GenBank, UniGene or LocusLink database.
The browsing or searching for specific genes in the result tables is allowed a dedicated tool.

Please cite the following reference:
Romualdi C, Bortoluzzi S, D'Alessi F, Danieli GA. (2003) IDEG6: a web tool for detection of differentially expressed genes in multiple tag sampling experiments. Physiol Genomics. 12(2):159-62.

INPUT DATA ?

Paste your input data

Or upload input data


LINKING ?

Select the Accession Number you are using to identify genes in order to obtain correct linking of your results to databases


TEST SELECTION ?

Select Test statistic

Select significance threshold

Audic and Claverie
Fisher exact test
Chi-squared 2X2
Greller and Tobin
R of Stekel and Falciani
General Chi-squared
Bonferroni Correction ? yes no

SUBMIT


ACCESS STATISTICS

View the access statistics of IDEG6.

Page by Chiara Romualdi and Stefania Bortoluzzi
Last update: November 19, 2003