The Human Retina transcriptional profile
Unigene entry Hs.89506 (Jan, 14th, 2000).


Hs.89506 Homo sapiens PAX6

Paired box gene 6 (aniridia, keratitis)

SEE ALSO
 
LocusLink: 5080
OMIM: 106210

SELECTED MODEL ORGANISM PROTEIN SIMILARITIES
H. sapiens: PIR:A41644 - homeotic protein aniridia 99 % / 446 aa
M. musculus: SP:P32117 - PAIRED BOX PROTEIN PAX-6 99 % / 421 aa
R. norvegicus: SP:P70601 - PAIRED BOX PROTEIN PAX-6 99 % / 421 aa
D. melanogaster: PID:g4883932 - transcription factor Toy 64 % / 417 aa
C. elegans: PID:g3875897 - similar to 'Paired box' domain, homeobox protein 54 % / 405 aa
S. cerevisiae: PID:e253225 - ORF YDL106c 28 % / 89 aa

MAPPING INFORMATION
Cytogenetic Position: 11p13

EXPRESSION INFORMATION
cDNA sources: Brain, Eye, Germ Cell, Testis, Uterus
SAGE : Gene to Tag mapping

mRNA/GENE SEQUENCES (5)
M93650 Human paired box gene (PAX6) homologue, complete cds Protein similarity
M77844 H.sapiens oculorhombin (aniridia) mRNA, complete cds Protein similarityPolyadenylation signal
S70304 PAX6=paired box and homeobox gene {translational termination mutation} [human, familial and sporadic aniridia patient AN017, Genomic Mutant, 72 nt] Protein similarity
S70305 PAX6=paired box and homeobox gene {translational termination mutation} [human, familial and sporadic aniridia patient AN015, Genomic Mutant, 72 nt] Protein similarity
S70307 PAX6=paired box and homeobox gene {translational termination mutation} [human, familial and sporadic aniridia patient AN1W, Genomic, 72 nt] Protein similarity

EST SEQUENCES (24)
  H14883 cDNA clone IMAGE:48926 Brain 5' read 2.5 kbProtein similarity
  AI337595 cDNA clone IMAGE:1998409 Brain 3' read 1.9 kbProtein similarityFrom a CGAP library
  H86881 cDNA clone IMAGE:220373 Eye 5' read 1.3 kbProtein similarity
  R95996 cDNA clone IMAGE:230882 Brain 5' read 0.8 kbProtein similarity
  R95962 cDNA clone IMAGE:230882 Brain 3' read 0.8 kbProtein similarity
  AI652359 cDNA clone IMAGE:2310081 Germ Cell 3' read 0.7 kbProtein similarityFrom a CGAP library
  AI921916 cDNA clone IMAGE:2452729 Uterus 3' read Protein similarityFrom a CGAP library
  AI953046 cDNA clone IMAGE:2474621 Germ Cell 3' read From a CGAP library
  AW148671 cDNA clone IMAGE:2616781 Brain 3' read From a CGAP library
  AW139291 cDNA clone IMAGE:2715950 3' read From a CGAP library
  T27922 cDNA clone ATCC:100523 Eye 5' read Protein similarity
  T09185 cDNA clone HIBBQ26 Brain 5' read Protein similarity
  AA773605 cDNA clone 844835 3' read Protein similarity
  W28166 cDNA clone (no-name) Eye Protein similarity
  W26727 cDNA clone (no-name) Eye Protein similarity
  W27739 cDNA clone (no-name) Eye Protein similarity
  W27796 cDNA clone (no-name) Eye Protein similarity
  F04066 cDNA clone c-2if04 Brain 3' read Protein similarity
  W25954 cDNA clone (no-name) Eye Protein similarity
  T16076 cDNA clone IB3110 Brain 3' read Protein similarity
  F07809 cDNA clone c-2if04 Brain
  AA889697 cDNA clone IMAGE:1409775 Testis 3' read Protein similarityFrom a CGAP library
  W27264 cDNA clone (no-name) Eye Protein similarity
  W28355 cDNA clone (no-name) Eye Protein similarity

Key to Symbols

Has similarity to known Proteins (after translation)
Contains a poly-Adenylation signal
Contains a mapped Sequence-tagged site (STS)
Clone source is a CGAP library

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